Technical Reports

Technical Reports

K. Hoffmann. Diffusion constant under projection. MOSAIC technical report, MOSAIC Group, MPI-CBG, 2017. (PDF)


A. Gupta. Comparison between basic convolution and recursive method, and an alternative approach to recursive implementation on parallel architecture. MOSAIC technical report, MOSAIC Group, MPI-CBG, 2016.


S. Schneider and I. F. Sbalzarini. Finding faces in a planar embedding of a graph. MOSAIC technical report, MOSAIC Group, MPI-CBG, 2015. (PDF)


S. Schneider. Segmentation of zebrafish vasculature. MOSAIC technical report, MOSAIC Group, MPI-CBG, July 2015. (PDF)


S. Schneider. 3D epithelial segmentation. MOSAIC technical report, MOSAIC Group, MPI-CBG, July 2015. (PDF)


V. Narula. Comparative Analysis of Synthetic Optimization Strategies Employed in Classification of BBOB Dataset with Speculated Natural Analogies of BBOB Functions and their Corresponding Phenomenological Algorithms. MOSAIC technical report, MOSAIC Group, MPI-CBG, 2015.


A. Ghaemi. Surface Analysis of Realistic 3D Bile Canalicular Lumen. MOSAIC technical report, MOSAIC Group, MPI-CBG, June 2014. (PDF)


Ö. Demirel and I. F. Sbalzarini. Distributed dynamic load balancing in massively parallel scientific numerical simulations. MOSAIC technical report, MOSAIC Group, MPI-CBG, March 2014. (PDF)


Ö. Demirel and I. F. Sbalzarini. Balancing indivisible real-valued loads in arbitrary networks. MOSAIC technical report, MOSAIC Group, MPI-CBG, August 2013. (PDF)


T. Lampart. Implementation and Performance Comparison of an Ensemble Sampler with Affine Invariance. MOSAIC technical report, MOSAIC Group, ETH Zürich, June 2012. (PDF)


P. Hoppen. Image segmentation through localized energy vector fields. MOSAIC technical report, MOSAIC Group, ETH Zürich, May 2012. (PDF, Software Download)


Ö. Demirel, N. Fiétier, and I. F. Sbalzarini. Solving the EEG forward problem with a meshless particle method. MOSAIC technical report, MOSAIC Group, ETH Zürich, April 2012. (PDF)


B. Thijssen. Extending pSSAlib to spatiotemporal reaction-diffusion simulations. MOSAIC technical report, MOSAIC Group, ETH Zürich, February 2012. (PDF, Software Download)


P. Plattner. Efficient Implementation of a Gibbs Sampler for Multivariate Truncated Gaussian and of the Gaussian Adaptation Algorithm. MOSAIC technical report, MOSAIC Group, ETH Zürich, June 2011. (PDF, Software Download)


N. Fietier. Eigenvalue spectra of various operators using the PSE-DC formulation. MOSAIC technical report, MOSAIC Group, ETH Zürich, May 2011. (PDF)


S. Gupta. Molecular Dynamics simulations of lipid bilayers. MOSAIC technical report, MOSAIC Group, ETH Zürich, 2011. (PDF)


C. L. Müller. Finding maximizing Euclidean TSP tours for the Hame-Hyytia-Hakula conjecture. MOSAIC technical report, MOSAIC Group, ETH Zürich, April 2011. (PDF)


J. Helmuth. Tug-of-War Model for Intracellular Motion of Vesicles. MOSAIC technical report, MOSAIC Group, ETH Zürich, 2010. (PDF)


C. L. Müller, G. Ofenbeck, B. Baumgartner, and I. F. Sbalzarini. pCMALib – Manual for version 1.0. MOSAIC technical report, MOSAIC Group, ETH Zürich, May 2010. (PDF)


Y Misteli and G. Ofenbeck. BFGS in memetic CMA-ES. MOSAIC technical report, MOSAIC Group, ETH Zürich, February 2010. (PDF)


B. Schrader. Burgers’ Equation with Adaptive Particles. MOSAIC technical report, MOSAIC Group, ETH Zürich, February 2010. (PDF)


M. Herve. GFRD implementation. MOSAIC technical report, MOSAIC Group, ETH Zürich, November 2009. (PDF)


C. L. Müller. Benchmark runs of pCMALib on Nehalem and Shanghai nodes. MOSAIC technical report, MOSAIC Group, ETH Zürich, April 2009. (PDF)


J. Helmuth and J. Cardinale. Bias Reduction of Centroid Detection. MOSAIC technical report, MOSAIC Group, ETH Zürich, 2009. (PDF)


J. Helmuth. Stochastic Simulation of Reacting Particles. MOSAIC technical report, MOSAIC Group, ETH Zürich, 2009. (PDF)


Y. Misteli. Global Optimization of Lennard Jones Clusters with PS-CMA-ES. MOSAIC technical report, MOSAIC Group, ETH Zürich, 2009. (PDF)


B. Schrader. Relationship of the corrected PSE operator to finite difference schemes. MOSAIC technical report, MOSAIC Group, ETH Zürich, January 2009. (PDF)


B. Schrader. Discretization correction for the PSE operator. MOSAIC technical report, MOSAIC Group, ETH Zürich, August 2008. (PDF)


B. Schrader. Some notes on the convergence of the corrected discrete integral operator Qε∗g towards Dg = ∇ · (L(x) · ∇g(x)) and implications for its suitability for solving the EEG/MEG forward problem. MOSAIC technical report, MOSAIC Group, ETH Zürich, July 2008. (PDF)


B. Schrader. The corrected discrete integral operator Qε∗g as an approximation to Dg = ∇ · (L(x) · ∇g(x)) for random particle distributions. MOSAIC technical report, MOSAIC Group, ETH Zürich, June 2008. (PDF)


B. Schrader. Corrected discrete Eldredge operators Lβ∗g as an approximation to the derivative ∂βg for random particle distributions. MOSAIC technical report , MOSAIC Group, ETH Zürich, June 2008. (PDF)


B. Schrader. The error Dg − Qεhg for some one-dimensional functions g(x). MOSAIC technical report, MOSAIC Group, ETH Zürich, June 2008. (PDF)


Y. Safa. Reaction-diffusion problem with concentration driven deformation. MOSAIC technical report, Institute of Computational Science (ICoS), ETH Zürich, 2006. (PDF)


I. F. Sbalzarini. Analysis, Modeling, and Simulation of Diffusion Processes in Cell Biology. PhD thesis, ETH Diss. No. 16440, ETH Zürich, 2006. (PDF)


I. F. Sbalzarini. Why diffusion on a domain with complex boundary appears anomalous. ICoS technical report, Institute of Computational Science (ICoS), ETH Zürich, 2005. (PDF)


I. F. Sbalzarini. Moments of displacement and their spectrum. ICoS technical report, Institute of Computational Science (ICoS), ETH Zürich, 2005. (PDF)


N. González-Segredo. Lattice-Boltzmann simulations of colloid entrapment in amphiphilic mesophases: algorithm development and preliminary tests. Technical report, High Performance Computing Center Stuttgart, 2004. (PDF)


C. L. Müller. High order accurate numerical solution of the linearized Euler equations for sound propagation in the atmosphere. Master Thesis, Uppsala University, 2004. (PDF)


I. F. Sbalzarini. Lumped parameter models for ER diffusion in budding yeast cells. ICoS technical report, Institute of Computational Science (ICoS), ETH Zürich, 2003. (PDF)


I. F. Sbalzarini. A MATLAB toolbox for virus particle tracking. ICoS technical report, Institute of Computational Science (ICoS), ETH Zürich, 2003. (PDF)


I. F. Sbalzarini. Diffusion in the Endoplasmic Reticulum: Theoretical foundation, computer simulations, models. Diploma Thesis, ETH Zurich, 2002. (PDF)


I. F. Sbalzarini. On Protein Diffusion in the Endoplasmic Reticulum: A computational approach using particle simulations. Semester Thesis, ETH Zurich, 2001. (PDF)